Next Generation Sequencing (NGS)/Method template
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Each method section should have the following general format:
Here is a version you can copy paste:
== Overview == A brief description of the method here, broadly covering what we are doing and why. === Useful background === Links to other relevant sections of the wikibook, like this [[/RNA]]. === Objective === What does the method achieve? === Biological questions === Why are we doing this? == Inputs and outputs == === Inputs === * A list of the pre-requirements for the method ** like ** this === Outputs === * A list of the outputs ** like ** this == Experimental design == == Typical steps in the method == Each step has it's own template, described below. == Next steps == Discussion of where the method leads. == Workflows == === Example galaxy workflow === Link to an example galaxy workflow for for the method (including example datasets) on a given galaxy instance or to the XML document describing the workflow. === Example command line workflow === == Discussion == POV discussion about the method. Links to related discussion on BioStars: * {{NGS/Biostars|q=your search keyword}} * {{NGS/Biostars|q=your search keyword}}
Here is how it will look:
Overview
[edit | edit source]A brief description of the method here, broadly covering what we are doing and why.
Useful background
[edit | edit source]Links to other relevant sections of the wikibook, like this /RNA.
Objective
[edit | edit source]What does the method achieve?
Biological questions
[edit | edit source]Why are we doing this?
Inputs and outputs
[edit | edit source]Inputs
[edit | edit source]- A list of the pre-requirements for the method
- like
- this
Outputs
[edit | edit source]- A list of the outputs
- like
- this
Experimental design
[edit | edit source]Typical steps in the method
[edit | edit source]Each step has it's own template, described below.
Next steps
[edit | edit source]Discussion of where the method leads.
Workflows
[edit | edit source]Example galaxy workflow
[edit | edit source]Link to an example galaxy workflow for for the method (including example datasets) on a given galaxy instance or to the XML document describing the workflow.
Example command line workflow
[edit | edit source]Discussion
[edit | edit source]POV discussion about the method.
Links to related discussion on BioStar: