GENtle/Release notes
< GENtle
1.9.5 alpha 2 (in preparation)
[edit | edit source]- Source code reorganisation to prepare for automated testing.
- Documentation transitioned from Wikibooks to Markdown into the code tree (docs/manual.adoc).
- https access to NCBI web services like pubmed
This version is yet not stable enough for professional work.
1.9.5 alpha 1
[edit | edit source]Initial port to wxWidgets 3.
1.9.4
[edit | edit source]Last version available for wxWidgets 2
1.9.0
[edit | edit source]Additions
- Chinese language interface
1.8.8
[edit | edit source]Additions
- DNA can optionally be displayed in lowercase
- In the PCR module, amino acids that change due to primers are now marked in the resulting amino acid sequence
Bugfixes
- Silent mutation now shows correct fragment lengths
- Fixed screen update after undo bug
- Fixed dialog layout on OSX
1.8.6
[edit | edit source]Additions
- Sequencer data can not be viewed "in part" (via both context menu and command line options)
- Amino acid structures can now be displayed inline in the amino acid module
- The font size of the sequence can now be adjusted (for both screen and printer)
Bugfixes
- Find dialog now marks found restriction enzymes with correct length
1.8.5
[edit | edit source]Additions
- ~200 new restriction enzymes
- restriction enzyme can now be updated from ReBase
- partial restrictions can now be added to virtual gels
- virtual gels can now be copied/saved as images
- Lane names can now be changed in virtual gels
Bugfixes
- Fixed bug for non-palindromic restriction enzymes
- Fixed bug preventing saving of some plasmid maps
1.8.4
[edit | edit source]Additions
- Clone Manager import (limited due to lack of format description)
Bugfixes
- Fixed bug in auto-annotation
1.8.3
[edit | edit source]Additions
- Can now chose to search for sequence, items, enzymes, translations in Find Dialog
- Can now edit and delete restriction enzymes
Bugfixes
- Minor calculator bugs fixed
- Inserting restriction enzyme sites in PCR while editing used to crash, now fixed
1.8.2
[edit | edit source]Additions
- Option for using two toolbars
- Larger toolbar icons for Mac
- Highlighting function in Find dialog
- Online tools (via context menu) for DNA, protein, and alignments
- Module/Dialog-sensitive online help
Bugfixes
- fixed module refresh bug
- fixed search for restriction enzymes in Find dialog
- fixed coding region detection bug under Mac
- fixed virtual gel printing bug
1.8.1
[edit | edit source]Notes
- TIFF export deactivated due to patent enforcement
Additions
- Alignments can now be edited markup-wise
- Startup tips (re-)enabled
Bugfixes
- New sequences with more than 64KB text can now be entered again
- "OK" in Silmut/WhatCutsHere dialog with no entry selected doesn't crash anymore
- DNA markers can now be added and edited via "marker.txt"
- siRNA duplexes fix for features that cross the "zero" point
- fixed protease display in DNA module
- fixed 3'->5' strand extraction
- fixed enumeration bug when adding databases
- fixed restriction enzyme recognition/display bug
1.8.0
[edit | edit source]Additions
- new icons for Windows
- multiple DNA markers for virtual gel
- find siRNA duplexes
- turn plasmid map
- enforcing global (alternative) translation table
Bugfixes
- better Mac/Linux integration
- Miscellaneous